Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015794444.1_cds_XP_016438749.1_3349
CDS Infomation

[gene=LOC107764654] [db_xref=GeneID:107764654] [protein=pentatricopeptide repeat-containing protein At2g37320-like] [protein_id=XP_016438749.1] [location=complement(20193..21656)] [gbkey=CDS]
Sequence

ATGAGCAAGCTCCTTTTTCGTTATGTCATAAGAAAAAAGTCATCACTTCCCTTCCAAACG
GTCAACAAAACCAAGAGCCAATTCAAGGGCCAGAAATTCCTTGATATTTTAGCATCAAAG
CCAAATGTGACCAAGAATCATCAAAAATATCTTAACCTCATTGAGGACTTTCTTCAAACA
AATTCTGAACAAAATTGTACAAAACACGCATTGCATAAAGAACTGTCTTTTCCTTATTCA
ATGGAAGATTCAATCTCATTGCTTTTTAAGTTTCATAAAGAAGGGTCTAAAATTGGGGCG
AGTTCAGTGTCAAATGCTATGAGTTTATGTGCGTCAAAGAGAGATTTTAGGGTAGGGATT
CAAGTTCATTGCTTGGTGATTGTAAATGGGCTTTTGTCCAATGTTTATATTGGCAGTTCT
TTGATCACCTTTTATGGTAATTTTGGAGGAGTGGTGGATGCTTACCAGGTGTTTGACGAA
ATGCCTGTGAGGAATGTTGTGTCTTGGAGTGCTATGATAAATGGTTTTGCACAAGAGAAT
GAGGTCGATATGTGCTTGAAATTGTATAAAGGTATGATGGGCTTGACATTGAAACCAAAT
GAGTTCACGTTTACGAGCTTGCTGAGTTCGTGTATGGGTAGTGGGTGTTTTGGTCATGAC
AGGAGTGTTCACTGCCAAATAATTCATATGGGTTTTGATTCCTATATACATGTCGCAAAT
GCTCTTTTATCAATGTATTGTAAGTGTGGGGAAGTAAAGGATGCTTTTCACATTTTTGAA
AATATGAAGAGCAAAGATTTGGTGTCATGGAACTCGATGATCTGTGGATATGGACAGCAA
GGACATGCAATTCAAGCTATTGAACTTTTTGAGGAAATGAAGAAGCAGCAAAAAGTGAGA
CCTGATTCCATTACTTTCCTTGGGGTGTTATCTTCTTGCCGCCATGCAGGTTTTGTTAAA
GAAGGCATGTTTTACTTTAATTCAATGGTTGATTGCCGTGTGAAGCCAGAGCTGGATCAT
TATTCATGTATTGTAGACCTTCTCGGACGAGCACGGTTACTAGAAGAGGCATGGGAGTTT
ATCAAGAAGATGCCAATTCAACCAAATGGTGTCATCTGGGGTTCATTGCTTATGTCGTGC
AGGCTTCAGGGGAACTTTTGGTTGGGCATCGAGGCTGCAGAGAATAGGCTTACGCTGGAA
CCATGGTCCACCTCTACCCACTTGCAGCTGGTAAATTTATACGCTAGTTTAGGATACTGG
GATCAGGCAGCGAGAGTGCAGAAGTTGATGAAAGACAATGGACTTAAAAGGGATCCTGGT
TATAGTTGGATTGAGATTAAAAGTCAAGTTTTTCGCTTTACTGCTGAAGACATATCTATG
GGACATATTAAATCAATTGGTAGTTTGGTGGATATTTTGGTGGATCACATGAGAAGCTTT
GGTGTAGAAGAAACTTTCCAGTGA

Peptide Sequence

PEP ID

XP_016438749.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At2g37320-like [Nicotiana tabacum]
Sequence

MSKLLFRYVIRKKSSLPFQTVNKTKSQFKGQKFLDILASKPNVTKNHQKYLNLIEDFLQT
NSEQNCTKHALHKELSFPYSMEDSISLLFKFHKEGSKIGASSVSNAMSLCASKRDFRVGI
QVHCLVIVNGLLSNVYIGSSLITFYGNFGGVVDAYQVFDEMPVRNVVSWSAMINGFAQEN
EVDMCLKLYKGMMGLTLKPNEFTFTSLLSSCMGSGCFGHDRSVHCQIIHMGFDSYIHVAN
ALLSMYCKCGEVKDAFHIFENMKSKDLVSWNSMICGYGQQGHAIQAIELFEEMKKQQKVR
PDSITFLGVLSSCRHAGFVKEGMFYFNSMVDCRVKPELDHYSCIVDLLGRARLLEEAWEF
IKKMPIQPNGVIWGSLLMSCRLQGNFWLGIEAAENRLTLEPWSTSTHLQLVNLYASLGYW
DQAARVQKLMKDNGLKRDPGYSWIEIKSQVFRFTAEDISMGHIKSIGSLVDILVDHMRSF
GVEETFQ

Transcript Sequence

Gene sequence data has not been registered.